ENSDARG00000027353


Danio rerio

Features
Gene ID: ENSDARG00000027353
  
Biological name :zmym2
  
Synonyms : zinc finger, MYM-type 2 / zmym2
  
Possible biological names infered from orthology : Q3U2E2 / Q9CU65 / Q9UBW7 / Q9UJ78 / zinc finger, MYM-type 5 / zinc finger MYM-type containing 2 / zinc finger MYM-type containing 5 / ZMYM5
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 21430311
Gene end: 21460164
  
Corresponding Affymetrix probe sets: Dr.26543.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114731
Ensembl peptide - ENSDARP00000116661
NCBI entrez gene - 570149     See in Manteia.
swissprot - B0S766
swissprot - B0S767
ZFIN ID - ZDB-GENE-030131-2408
Ensembl - ENSDARG00000027353
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000017139Gallus gallus
 ENSGALG00000043421Gallus gallus
 ZMYM2ENSG00000121741Homo sapiens
 ZMYM5ENSG00000132950Homo sapiens
 Zmym2ENSMUSG00000021945Mus musculus
 Zmym5ENSMUSG00000040123Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zmym4 / zinc finger, MYM-type 4 / ZMYM6* / A2A791* / Q5VZL5* / O95789* / AC114490.2* / zinc finger, MYM-type 6* / zinc finger MYM-type containing 4* / zinc finger MYM-type containing 6*ENSDARG0000003582328
si:ch211-173p18.3 / ZMYM4* / ZMYM6* / A2A791* / O95789* / Q5VZL5* / AC114490.2* / zinc finger, MYM-type 6* / zinc finger, MYM-type 4* / zinc finger MYM-type containing 4* / zinc finger MYM-...ENSDARG0000003582127
si:ch211-266o15.1 / ZMYM4* / ZMYM6* / A2A791* / O95789* / Q5VZL5* / AC114490.2* / zinc finger, MYM-type 6* / zinc finger, MYM-type 4* / zinc finger MYM-type containing 4* / zinc finger MYM-...ENSDARG0000005768126
qrich1 / glutamine-rich 1 / Q2TAL8*ENSDARG0000001979711


Protein motifs (from Interpro)
Interpro ID Name
 IPR010507  Zinc finger, MYM-type
 IPR011017  TRASH domain
 IPR021893  Protein of unknown function DUF3504


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007010 cytoskeleton organization IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0022604 regulation of cell morphogenesis IBA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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