ENSDARG00000028053


Danio rerio

Features
Gene ID: ENSDARG00000028053
  
Biological name :bmp1b
  
Synonyms : bmp1b / bone morphogenetic protein 1b
  
Possible biological names infered from orthology : BMP1 / bone morphogenetic protein 1 / Bone morphotic protein 1 / P13497 / P98063
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 40848354
Gene end: 40939706
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000059794
Ensembl peptide - ENSDARP00000118475
Ensembl peptide - ENSDARP00000150088
swissprot - E9QIS8
swissprot - F1QPG2
ZFIN ID - ZDB-GENE-060818-2
Ensembl - ENSDARG00000028053
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BMP1ENSG00000168487Homo sapiens
 Bmp1ENSMUSG00000022098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bmp1a / bone morphogenetic protein 1a / BMP1* / P13497* / bone morphogenetic protein 1*ENSDARG0000002807179
tll1 / O57460 / tolloid-like 1 / O43897* / tolloid-like*ENSDARG0000003742969
cubn / cubilin (intrinsic factor-cobalamin receptor) / O60494* / cubilin*ENSDARG0000008701329
cdcp2 / CUB domain containing protein 2 / Q5VXM1* / Q8BQH6*ENSDARG0000007586613
pcolceb / procollagen C-endopeptidase enhancer b / Q61398* / PCOLCE* / Q15113* / procollagen C-endopeptidase enhancer* / Procollagen C-endopeptidase enhancer 1 *ENSDARG0000005205712
pcolcea / procollagen C-endopeptidase enhancer a / Q61398* / PCOLCE* / Q15113* / procollagen C-endopeptidase enhancer* / Procollagen C-endopeptidase enhancer 1 *ENSDARG0000005691312
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / neuropilin and tolloid like 2*ENSDARG0000011210012
neto1l / neuropilin (NRP) and tolloid (TLL)-like 1, like / NETO1* / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000007159611
si:cabz01033205.3 / MFRP* / Q8K480* / Q9BY79* / membrane frizzled-related protein*ENSDARG0000008781411
pcolce2a / procollagen C-endopeptidase enhancer 2a / Q9UKZ9* / Q8R4W6* / PCOLCE2* / procollagen C-endopeptidase enhancer 2*ENSDARG0000000845010
pimr62 / pcolce2b / procollagen C-endopeptidase enhancer 2b / Q9UKZ9* / Q8R4W6* / PCOLCE2* / procollagen C-endopeptidase enhancer 2*ENSDARG0000005557510
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / Q8BNJ6* / neuropilin and tolloid like 2* / Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2 (Neto2), transcrip...ENSDARG0000006329310
neto1 / neuropilin (NRP) and tolloid (TLL)-like 1 / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000006848310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001506  Peptidase M12A
 IPR001881  EGF-like calcium-binding domain
 IPR006026  Peptidase, metallopeptidase
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR015446  Bone morphogenetic protein 1/tolloid-like protein
 IPR018097  EGF-like calcium-binding, conserved site
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR034036  Tolloid/BMP1 peptidase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
Collagen biosynthesis and modifying enzymes
Anchoring fibril formation
Crosslinking of collagen fibrils
HDL assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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