ENSDARG00000029936


Danio rerio

Features
Gene ID: ENSDARG00000029936
  
Biological name :grtp1a
  
Synonyms : growth hormone regulated TBC protein 1a / grtp1a
  
Possible biological names infered from orthology : growth hormone regulated TBC protein 1 / GRTP1 / Q5TC63 / Q9D3N8
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 184915
Gene end: 192033
  
Corresponding Affymetrix probe sets: Dr.9986.1.A1_at (Zebrafish Array)   NM_213402_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131713
Ensembl peptide - ENSDARP00000136129
NCBI entrez gene - 406711     See in Manteia.
RefSeq - NM_213402
RefSeq Peptide - NP_998567
swissprot - A8KBR5
swissprot - A0A0R4ICC5
ZFIN ID - ZDB-GENE-040426-2733
Ensembl - ENSDARG00000029936
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GRTP1ENSGALG00000016828Gallus gallus
 GRTP1ENSG00000139835Homo sapiens
 Grtp1ENSMUSG00000038515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
grtp1b / growth hormone regulated TBC protein 1b / GRTP1* / Q5TC63* / Q9D3N8* / growth hormone regulated TBC protein 1*ENSDARG0000003026965
tbc1d10b / TBC1 domain family, member 10b / Q4KMP7* / Q8BHL3*ENSDARG0000007860428
tbc1d10ab / TBC1 domain family, member 10Ab / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000006009625
tbc1d10c / TBC1 domain family, member 10C / Q8C9V1* / Q8IV04* / Carabin *ENSDARG0000003740824
si:ch211-266k8.4ENSDARG0000008684021
tbc1d10aa / TBC1 domain family, member 10Aa / P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSDARG0000010207021
si:ch211-288d18.1 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TB...ENSDARG0000001108820
usp6nl / USP6 N-terminal like / Q80XC3* / Q92738*ENSDARG0000002218720
si:dkeyp-19e1.3 / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / A6NDS4* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1...ENSDARG0000005183620


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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