ENSGALG00000016828


Gallus gallus

Features
Gene ID: ENSGALG00000016828
  
Biological name :GRTP1
  
Synonyms : growth hormone regulated TBC protein 1 / GRTP1
  
Possible biological names infered from orthology : Q5TC63 / Q9D3N8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 137458314
Gene end: 137486611
  
Corresponding Affymetrix probe sets: Gga.10792.1.S1_at (Chicken Array)   Gga.2183.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027118
Ensembl peptide - ENSGALP00000064019
Ensembl peptide - ENSGALP00000063048
Ensembl peptide - ENSGALP00000052298
Ensembl peptide - ENSGALP00000050157
Ensembl peptide - ENSGALP00000043711
NCBI entrez gene - 418742     See in Manteia.
RefSeq - XM_416941
swissprot - A0A1L1RW27
swissprot - A0A1D5PHL8
swissprot - A0A1L1RYT7
swissprot - A0A1D5NTQ4
swissprot - F1P2U9
swissprot - A0A1D5PBM7
Ensembl - ENSGALG00000016828
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grtp1aENSDARG00000029936Danio rerio
 grtp1bENSDARG00000030269Danio rerio
 GRTP1ENSG00000139835Homo sapiens
 Grtp1ENSMUSG00000038515Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P58802* / Q9BXI6* / TBC1D10A* / AC004997.1* / TBC1 domain family member 10A*ENSGALG0000000795427
A6NDS4* / B9A6J9* / TBC1D3* / P0C7X1* / Q2M2D7* / Q6DHY5* / Q6IPX1* / Q8IZP1* / Q86UD7* / TBC1D3F* / TBC1D3H* / TBC1D3G* / TBC1D3I* / TBC1D3K* / TBC1D3L* / TBC1D26* / TBC1D28* / TBC1D3B* / ...ENSGALG0000003922122
USP6NL / USP6 N-terminal-like protein / Q80XC3* / Q92738* / USP6 N-terminal like*ENSGALG0000003556321


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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