ENSDARG00000030116


Danio rerio

Features
Gene ID: ENSDARG00000030116
  
Biological name :susd6
  
Synonyms : susd6 / sushi domain containing 6
  
Possible biological names infered from orthology : Q8BGE4 / Q92537
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 28885990
Gene end: 28932038
  
Corresponding Affymetrix probe sets: Dr.11364.1.A1_at (Zebrafish Array)   Dr.18195.1.A1_at (Zebrafish Array)   NM_001044755_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127300
Ensembl peptide - ENSDARP00000046041
NCBI entrez gene - 336888     See in Manteia.
RefSeq - NM_001044755
RefSeq - XM_005160642
RefSeq - XM_005160641
RefSeq Peptide - NP_001038220
swissprot - Q5SPG9
swissprot - U3JAN2
ZFIN ID - ZDB-GENE-030131-8832
Ensembl - ENSDARG00000030116
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUSD6ENSGALG00000009428Gallus gallus
 SUSD6ENSG00000100647Homo sapiens
 Susd6ENSMUSG00000021133Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
susd4 / E7FEC4 / sushi domain containing 4 / Q5VX71* / Q8BH32* / Mus musculus sushi domain containing 4 (Susd4), transcript variant 4, mRNA.*ENSDARG0000002633528
zgc:152863ENSDARG0000009996916


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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