ENSDARG00000030626


Danio rerio

Features
Gene ID: ENSDARG00000030626
  
Biological name :lrit2
  
Synonyms : leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 / lrit2
  
Possible biological names infered from orthology : A6NDA9 / leucine rich repeat, Ig-like and transmembrane domains 2 / Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 / Q6PFC5
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 29470442
Gene end: 29474304
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000036969
NCBI entrez gene - 553557     See in Manteia.
RefSeq - NM_001020536
RefSeq Peptide - NP_001018372
swissprot - B8A5X4
ZFIN ID - ZDB-GENE-050522-160
Ensembl - ENSDARG00000030626
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRIT2ENSGALG00000002307Gallus gallus
 LRIT2ENSG00000204033Homo sapiens
 Lrit2ENSMUSG00000043418Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrit1b / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b / LRIT1* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1*ENSDARG0000009940628
lrit1a / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a / LRIT1* / Q8K099* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1* / Leucine-rich repeat...ENSDARG0000001917927
lrit3a / info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a / LRIT3* / Q3SXY7* / W8DXL4* / leucine rich repeat, Ig-like and transmembrane domains 3* / Leucine-rich r...ENSDARG0000005546327
lrit3b / leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b / LRIT3* / Q3SXY7* / W8DXL4* / leucine rich repeat, Ig-like and transmembrane domains 3* / Leucine-rich repeat...ENSDARG0000005705421
islr2 / immunoglobulin superfamily containing leucine-rich repeat 2 / ISLR* / O14498* / Q5RKR3* / Q6GU68* / Q6UXK2* / immunoglobulin superfamily containing leucine rich repeat* / Immunoglob...ENSDARG0000005187519


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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