ENSDARG00000057054


Danio rerio

Features
Gene ID: ENSDARG00000057054
  
Biological name :lrit3b
  
Synonyms : leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b / lrit3b
  
Possible biological names infered from orthology : leucine rich repeat, Ig-like and transmembrane domains 3 / Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 / LRIT3 / Q3SXY7 / W8DXL4
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 12591508
Gene end: 12602920
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000093087
NCBI entrez gene - 100144406     See in Manteia.
RefSeq - NM_001145630
RefSeq Peptide - NP_001139102
swissprot - B8JIB3
ZFIN ID - ZDB-GENE-070424-130
Ensembl - ENSDARG00000057054
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRIT3ENSGALG00000026627Gallus gallus
 LRIT3ENSG00000183423Homo sapiens
 Lrit3ENSMUSG00000093865Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrit3a / info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a / LRIT3* / Q3SXY7* / W8DXL4* / leucine rich repeat, Ig-like and transmembrane domains 3* / Leucine-rich r...ENSDARG0000005546345
lrit1b / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b / LRIT1* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1*ENSDARG0000009940637
lrit1a / leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a / LRIT1* / Q8K099* / Q9P2V4* / leucine rich repeat, Ig-like and transmembrane domains 1* / Leucine-rich repeat...ENSDARG0000001917936
lrit2 / leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 / A6NDA9* / Q6PFC5* / leucine rich repeat, Ig-like and transmembrane domains 2* / Leucine-rich repeat, immunoglo...ENSDARG0000003062627
islr2 / immunoglobulin superfamily containing leucine-rich repeat 2 / ISLR* / O14498* / Q5RKR3* / Q6GU68* / Q6UXK2* / immunoglobulin superfamily containing leucine rich repeat* / Immunoglob...ENSDARG0000005187520


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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