ENSDARG00000030905


Danio rerio

Features
Gene ID: ENSDARG00000030905
  
Biological name :cited2
  
Synonyms : Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 / cited2
  
Possible biological names infered from orthology : Cbp/p300-interacting transactivator 2 / O35740 / Q99967
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 36915143
Gene end: 36917670
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000046715
NCBI entrez gene - 450024     See in Manteia.
RefSeq - NM_001006045
RefSeq Peptide - NP_001006045
swissprot - F1R408
ZFIN ID - ZDB-GENE-041010-141
Ensembl - ENSDARG00000030905
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CITED2ENSGALG00000013818Gallus gallus
 CITED2ENSG00000164442Homo sapiens
 Cited2ENSMUSG00000039910Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cited4a / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a / Q9WUL8* / CITED4* / Q96RK1* / Cbp/p300-interacting transactivator 4 * / Cbp/p300 interacting t...ENSDARG0000003599039
cited4b / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b / Q9WUL8* / CITED4* / Q96RK1* / Cbp/p300-interacting transactivator 4 * / Cbp/p300 interacting t...ENSDARG0000010100938
cited1 / Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 / P97769* / Q99966* / Cbp/p300-interacting transactivator 1 *ENSDARG0000007776924


Protein motifs (from Interpro)
Interpro ID Name
 IPR007576  CITED


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0032502 developmental process IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
Regulation of gene expression by Hypoxia-inducible Factor
Activation of the TFAP2 (AP-2) family of transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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