ENSDARG00000033273


Danio rerio

Features
Gene ID: ENSDARG00000033273
  
Biological name :primpol
  
Synonyms : primase and polymerase (DNA-directed) / primpol / Q32PL8
  
Possible biological names infered from orthology : DNA-directed primase/polymerase protein / primase and DNA directed polymerase / Q6P1E7 / Q96LW4
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 21563311
Gene end: 21573013
  
Corresponding Affymetrix probe sets: Dr.25617.1.A1_at (Zebrafish Array)   NM_001037378_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022890
Ensembl peptide - ENSDARP00000122450
Ensembl peptide - ENSDARP00000120204
NCBI entrez gene - 556571     See in Manteia.
RefSeq - NM_001037378
RefSeq Peptide - NP_001032455
swissprot - E9QH71
swissprot - E9QGS9
swissprot - Q32PL8
ZFIN ID - ZDB-GENE-051113-100
Ensembl - ENSDARG00000033273
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRIMPOLENSGALG00000010636Gallus gallus
 Q96LW4ENSG00000164306Homo sapiens
 Q6P1E7ENSMUSG00000038225Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006264 mitochondrial DNA replication ISS
 biological_processGO:0006269 DNA replication, synthesis of RNA primer IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0009411 response to UV ISS
 biological_processGO:0019985 translesion synthesis ISS
 biological_processGO:0032774 RNA biosynthetic process IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix ISS
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003887 DNA-directed DNA polymerase activity ISS
 molecular_functionGO:0003896 DNA primase activity ISS
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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