ENSDARG00000033726


Danio rerio

Features
Gene ID: ENSDARG00000033726
  
Biological name :tshba
  
Synonyms : thyroid stimulating hormone, beta subunit, a / tshba
  
Possible biological names infered from orthology : P01222 / thyroid stimulating hormone beta / thyroid stimulating hormone, beta subunit / TSHB
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 49081141
Gene end: 49085296
  
Corresponding Affymetrix probe sets: Dr.24255.1.S1_at (Zebrafish Array)   NM_181494_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108432
Ensembl peptide - ENSDARP00000154219
Ensembl peptide - ENSDARP00000049999
NCBI entrez gene - 353223     See in Manteia.
RefSeq - NM_181494
RefSeq Peptide - NP_852471
swissprot - B3DJU0
ZFIN ID - ZDB-GENE-030513-3
Ensembl - ENSDARG00000033726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSHBENSGALG00000002550Gallus gallus
 TSHBENSG00000134200Homo sapiens
 TshbENSMUSG00000027857Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CU929146.1 / TSHB* / P01222* / thyroid stimulating hormone beta* / thyroid stimulating hormone, beta subunit*ENSDARG0000011011034
lhb / luteinizing hormone, beta polypeptide / CGB2* / CGB3* / CGB1* / CGB7* / CGB8* / CGB5* / A6NKQ9* / P01229* / P0DN86* / P0DN87* / AC008687.1* / chorionic gonadotropin beta subunit 2* / ...ENSDARG0000009936326
fshb / follicle stimulating hormone, beta polypeptide / P01225* / Q60687* / Follitropin subunit beta * / follicle stimulating hormone beta subunit*ENSDARG0000001084121


Protein motifs (from Interpro)
Interpro ID Name
 IPR001545  Gonadotropin, beta subunit
 IPR006208  Glycoprotein hormone subunit beta
 IPR018245  Gonadotropin, beta subunit, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0009755 hormone-mediated signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005179 hormone activity IBA


Pathways (from Reactome)
Pathway description
Glycoprotein hormones
Hormone ligand-binding receptors
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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