ENSDARG00000034941


Danio rerio

Features
Gene ID: ENSDARG00000034941
  
Biological name :si:dkey-224e22.2
  
Synonyms : si:dkey-224e22.2
  
Possible biological names infered from orthology : galactosidase beta 1 like 2 / galactosidase beta 1 like 3 / GLB1L2 / GLB1L3 / Gm1110 / Q8IW92 / Q8NCI6
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 44746594
Gene end: 44765515
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120055
Ensembl peptide - ENSDARP00000120223
Ensembl peptide - ENSDARP00000150017
NCBI entrez gene - 799022     See in Manteia.
swissprot - A2BIK1
swissprot - A2BIK2
ZFIN ID - ZDB-GENE-061207-59
Ensembl - ENSDARG00000034941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000001604Gallus gallus
 GLB1L2ENSG00000149328Homo sapiens
 GLB1L3ENSG00000166105Homo sapiens
 Glb1l2ENSMUSG00000036395Mus musculus
 Glb1l3ENSMUSG00000031966Mus musculus
 Gm1110ENSMUSG00000079644Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glb1 / galactosidase, beta 1 / P16278* / P23780*ENSDARG0000003641536
glb1l / galactosidase, beta 1-like / Q6UWU2*ENSDARG0000002995535
b3gat1b / beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b / Q8NCI6* / GLB1L3* / Q8IW92* / GLB1L2* / galactosidase beta 1 like 3* / galactosidase beta 1 like 2*ENSDARG0000005527926


Protein motifs (from Interpro)
Interpro ID Name
 IPR001944  Glycoside hydrolase, family 35
 IPR008979  Galactose-binding-like domain superfamily
 IPR017853  Glycoside hydrolase superfamily
 IPR019801  Glycoside hydrolase, family 35, conserved site
 IPR026283  Beta-galactosidase 1-like
 IPR031330  Glycoside hydrolase 35, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0044782 cilium organization IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0097546 ciliary base IDA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0004565 beta-galactosidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000150 pronephric duct pronephric duct cilium decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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