ENSDARG00000036415


Danio rerio

Features
Gene ID: ENSDARG00000036415
  
Biological name :glb1
  
Synonyms : galactosidase, beta 1 / glb1
  
Possible biological names infered from orthology : P16278 / P23780
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 52462068
Gene end: 52478746
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106759
NCBI entrez gene - 548343     See in Manteia.
RefSeq - XM_005160132
swissprot - A2BG54
ZFIN ID - ZDB-GENE-050410-9
Ensembl - ENSDARG00000036415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLB1ENSGALG00000040028Gallus gallus
 GLB1ENSG00000170266Homo sapiens
 Glb1ENSMUSG00000045594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glb1l / galactosidase, beta 1-like / Q6UWU2*ENSDARG0000002995554
si:dkey-224e22.2 / Gm1110* / GLB1L2* / GLB1L3* / Q8IW92* / Q8NCI6* / galactosidase beta 1 like 3* / galactosidase beta 1 like 2*ENSDARG0000003494132
b3gat1b / beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b / Q8NCI6* / GLB1L3* / Q8IW92* / GLB1L2* / galactosidase beta 1 like 3* / galactosidase beta 1 like 2*ENSDARG0000005527914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001944  Glycoside hydrolase, family 35
 IPR008979  Galactose-binding-like domain superfamily
 IPR017853  Glycoside hydrolase superfamily
 IPR019801  Glycoside hydrolase, family 35, conserved site
 IPR025300  Beta-galactosidase jelly roll domain
 IPR026283  Beta-galactosidase 1-like
 IPR031330  Glycoside hydrolase 35, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0004565 beta-galactosidase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
Keratan sulfate degradation
HS-GAG degradation
Sialic acid metabolism
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000008832 neu1 / neuraminidase 1 / O35657* / Q99519*  / complex






 

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