ENSDARG00000035391


Danio rerio

Features
Gene ID: ENSDARG00000035391
  
Biological name :ptcd2
  
Synonyms : pentatricopeptide repeat domain 2 / ptcd2
  
Possible biological names infered from orthology : Pentatricopeptide repeat-containing protein 2, mitochondrial / Q8R3K3 / Q8WV60
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 35253457
Gene end: 35264517
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097803
NCBI entrez gene - 550275     See in Manteia.
RefSeq - NM_001017612
RefSeq - XM_005171851
RefSeq Peptide - NP_001017612
swissprot - F1QQL7
ZFIN ID - ZDB-GENE-050417-82
Ensembl - ENSDARG00000035391
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTCD2ENSGALG00000038260Gallus gallus
 PTCD2ENSG00000049883Homo sapiens
 Ptcd2ENSMUSG00000021650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR034629  Pentatricopeptide repeat-containing protein 2, mitochondrial
 IPR034913  MRPS27/PTCD2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050684 regulation of mRNA processing IEA
 cellular_componentGO:0005739 mitochondrion IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr