ENSGALG00000038260


Gallus gallus
PTCD2smitochondrionregulationmusclemembranepentatricopeptiderepeatribosomalproteinmitochondrialkidneyliverorganizationheartgeneexpressionfibermrnaprocessingventricularcardiactissuemorphogenesisintegralcomponent

Features
Gene ID: ENSGALG00000038260
  
Biological name :PTCD2
  
Synonyms : pentatricopeptide repeat domain 2 / PTCD2
  
Possible biological names infered from orthology : Pentatricopeptide repeat-containing protein 2, mitochondrial / Q8R3K3 / Q8WV60
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 25250304
Gene end: 25266828
  
Corresponding Affymetrix probe sets: Gga.10677.1.S1_a_at (Chicken Array)   Gga.13948.1.A1_at (Chicken Array)   Gga.13948.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052651
NCBI entrez gene - 427217     See in Manteia.
RefSeq - XM_424804
swissprot - A0A1D5PIL7
Ensembl - ENSGALG00000038260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptcd2ENSDARG00000035391Danio rerio
 PTCD2ENSG00000049883Homo sapiens
 Ptcd2ENSMUSG00000021650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR019266  28S ribosomal protein S27, mitochondrial


Gene Ontology (GO)
anatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structure developmentcellular component organizationorganic substance metabolic processcellular developmental processnitrogen compound metabolic processcellular metabolic processprimary metabolic processanatomical structureanatomical structure developmentcellular component ocellular component organizationorganic substance meorganic substance metabolic processcellular developmentcellular developmental processnitrogen compound menitrogen compound metabolic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic process
cellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellcellorganelleorganellemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0048747 muscle fiber development IEA
 biological_processGO:0050684 regulation of mRNA processing IEA
 biological_processGO:0055010 ventricular cardiac muscle tissue morphogenesis IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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