ENSDARG00000035433


Danio rerio

Features
Gene ID: ENSDARG00000035433
  
Biological name :arpc5lb
  
Synonyms : actin related protein 2/3 complex, subunit 5-like, b / arpc5lb
  
Possible biological names infered from orthology : actin related protein 2/3 complex subunit 5 like / Actin-related protein 2/3 complex subunit 5-like protein / ARPC5L / Q9BPX5 / Q9D898
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 32060881
Gene end: 32074637
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102333
Ensembl peptide - ENSDARP00000118393
NCBI entrez gene - 556104     See in Manteia.
RefSeq - NM_001128686
RefSeq Peptide - NP_001122158
swissprot - F6NVQ2
swissprot - B0S516
ZFIN ID - ZDB-GENE-060531-161
Ensembl - ENSDARG00000035433
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARPC5LENSGALG00000001014Gallus gallus
 ARPC5LENSG00000136950Homo sapiens
 Arpc5lENSMUSG00000026755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arpc5la / actin related protein 2/3 complex, subunit 5-like, a / Q9D898* / ARPC5L* / Q9BPX5* / actin related protein 2/3 complex subunit 5 like* / Actin-related protein 2/3 complex subunit ...ENSDARG0000004172084
arpc5b / actin related protein 2/3 complex, subunit 5B / ARPC5* / O15511* / Q9CPW4* / actin related protein 2/3 complex subunit 5*ENSDARG0000001906268
arpc5a / actin related protein 2/3 complex, subunit 5A / ARPC5* / O15511* / Q9CPW4* / actin related protein 2/3 complex subunit 5*ENSDARG0000003914268


Protein motifs (from Interpro)
Interpro ID Name
 IPR006789  Actin-related protein 2/3 complex subunit 5
 IPR030075  Actin-related protein 2/3 complex subunit 5-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr