ENSDARG00000035555


Danio rerio

Features
Gene ID: ENSDARG00000035555
  
Biological name :gbgt1l3
  
Synonyms : gbgt1l3 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3
  
Possible biological names infered from orthology : GBGT1 / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) / Q8N5D6 / Q8VI38
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 23849647
Gene end: 23855447
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000051540
NCBI entrez gene - 447881     See in Manteia.
RefSeq - NM_001004620
RefSeq - XM_021476097
RefSeq Peptide - NP_001004620
swissprot - A2CED1
ZFIN ID - ZDB-GENE-040912-46
Ensembl - ENSDARG00000035555
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GBGT1ENSGALG00000003340Gallus gallus
 GBGT1ENSG00000148288Homo sapiens
 Gbgt1ENSMUSG00000026829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GBGT1 (1 of many) / si:ch211-287c22.1 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FOR...ENSDARG0000009194489
gbgt1l4 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000006850375
gbgt1l3 / si:ch211-135f11.4 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)*ENSDARG0000009196972
abo / ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acety...ENSDARG0000001920768
gbgt1l2 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000009271866
GBGT1 (1 of many) / si:ch211-135f11.5 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FOR...ENSDARG0000009193665
si:dkey-110k5.10 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)*ENSDARG0000001128355
gbgt1l1 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000002527554


Protein motifs (from Interpro)
Interpro ID Name
 IPR005076  Glycosyl transferase, family 6
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0009247 glycolipid biosynthetic process IBA
 biological_processGO:0030259 lipid glycosylation IBA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031982 vesicle IBA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IBA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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