ENSMUSG00000026829


Mus musculus

Features
Gene ID: ENSMUSG00000026829
  
Biological name :Gbgt1
  
Synonyms : Gbgt1 / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 / Q8VI38
  
Possible biological names infered from orthology : globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) / Q8N5D6
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: A3
Gene start: 28496891
Gene end: 28505415
  
Corresponding Affymetrix probe sets: 10470555 (MoGene1.0st)   1426148_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028172
Ensembl peptide - ENSMUSP00000127071
NCBI entrez gene - 227671     See in Manteia.
MGI - MGI:2449143
RefSeq - XM_017317269
RefSeq - NM_139197
RefSeq - XM_017317267
RefSeq - XM_017317268
RefSeq - XM_006497918
RefSeq - XM_006497922
RefSeq - XM_017317265
RefSeq - XM_017317266
RefSeq Peptide - NP_631936
swissprot - Q8VI38
Ensembl - ENSMUSG00000026829
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aboENSDARG00000019207Danio rerio
 GBGT1 (1 of many)ENSDARG00000091936Danio rerio
 GBGT1 (1 of many)ENSDARG00000091944Danio rerio
 gbgt1l1ENSDARG00000025275Danio rerio
 gbgt1l2ENSDARG00000092718Danio rerio
 gbgt1l3ENSDARG00000091969Danio rerio
 gbgt1l3ENSDARG00000035555Danio rerio
 gbgt1l4ENSDARG00000068503Danio rerio
 si:dkey-110k5.10ENSDARG00000011283Danio rerio
 GBGT1ENSGALG00000003340Gallus gallus
 GBGT1ENSG00000148288Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Abo / P38649 / Histo-blood group ABO system transferase / ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase*ENSMUSG0000001578739
Q3V1N9 / A3galt2 / alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) / U3KPV4* / alpha 1,3-galactosyltransferase 2*ENSMUSG0000002879437
Ggta1 / P23336 / N-acetyllactosaminide alpha-1,3-galactosyltransferase ENSMUSG0000003577837
4930402F06Rik / RIKEN cDNA 4930402F06 geneENSMUSG0000007942135
A2AUQ7 / 4930568D16Rik / N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 ENSMUSG0000002688230
Glt6d1 / Q2NKH9 / Glycosyltransferase 6 domain-containing protein 1 / Q7Z4J2* / glycosyltransferase 6 domain containing 1*ENSMUSG0000003640128


Protein motifs (from Interpro)
Interpro ID Name
 IPR005076  Glycosyl transferase, family 6
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0009247 glycolipid biosynthetic process IBA
 biological_processGO:0030259 lipid glycosylation TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031982 vesicle IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047277 globoside alpha-N-acetylgalactosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Fgfr1tm1.1(KOMP)Vlcg/Fgfr1tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Fgfr1tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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