ENSDARG00000035781


Danio rerio

Features
Gene ID: ENSDARG00000035781
  
Biological name :ctdnep1b
  
Synonyms : ctdnep1b / CTD nuclear envelope phosphatase 1b
  
Possible biological names infered from orthology : CTDNEP1 / CTD nuclear envelope phosphatase 1 / O95476 / Q3TP92
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 69449814
Gene end: 69467790
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000103636
Ensembl peptide - ENSDARP00000134570
Ensembl peptide - ENSDARP00000131949
NCBI entrez gene - 492799     See in Manteia.
RefSeq - NM_001007440
RefSeq Peptide - NP_001007441
swissprot - A0A0R4IFX1
swissprot - A0A0R4IDD7
swissprot - F1Q7Z2
ZFIN ID - ZDB-GENE-041114-152
Ensembl - ENSDARG00000035781
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O95476ENSG00000175826Homo sapiens
 Q3TP92ENSMUSG00000018559Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5U395 / ctdnep1a / CTD nuclear envelope phosphatase 1a / O95476* / Q3TP92* / CTDNEP1* / CTD nuclear envelope phosphatase 1*ENSDARG0000001651988
ctdsp1 / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 / P58466* / Q9GZU7* / CTD small phosphatase 1* / Carboxy-terminal domain RNA polymerase II polyp...ENSDARG0000004067433
ctdsplb / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b / CTDSPL* / O15194* / P58465* / CTD small phosphatase like* / CTD small phosphatase-like protein *ENSDARG0000006211633
ctdspla / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a / CTDSPL* / O15194* / P58465* / CTD small phosphatase like* / CTD small phosphatase-like protein *ENSDARG0000007167333
ctdsp2 / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 / O14595* / Q8BX07* / CTD small phosphatase 2* / Carboxy-terminal domain RNA polymerase II polyp...ENSDARG0000003610230


Protein motifs (from Interpro)
Interpro ID Name
 IPR004274  FCP1 homology domain
 IPR011948  Dullard phosphatase domain, eukaryotic
 IPR023214  HAD superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016311 dephosphorylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Depolymerisation of the Nuclear Lamina


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000036064 Q561X0 / cnep1r1 / CTD nuclear envelope phosphatase 1 regulatory subunit 1 / Q8N9A8* / Q3UJ81* / Nuclear envelope phosphatase-regulatory subunit 1 *  / complex






 

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