ENSDARG00000040674


Danio rerio

Features
Gene ID: ENSDARG00000040674
  
Biological name :ctdsp1
  
Synonyms : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 / ctdsp1
  
Possible biological names infered from orthology : Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 / CTD small phosphatase 1 / P58466 / Q9GZU7
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 41690153
Gene end: 41741420
  
Corresponding Affymetrix probe sets: Dr.5370.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000090999
NCBI entrez gene - 553744     See in Manteia.
RefSeq - XM_009304902
swissprot - B0S5V5
ZFIN ID - ZDB-GENE-050522-523
Ensembl - ENSDARG00000040674
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTDSP1ENSGALG00000027768Gallus gallus
 CTDSP1ENSG00000144579Homo sapiens
 Ctdsp1ENSMUSG00000026176Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ctdsplb / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b / CTDSPL* / O15194* / P58465* / CTD small phosphatase like* / CTD small phosphatase-like protein *ENSDARG0000006211669
ctdspla / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a / CTDSPL* / O15194* / P58465* / CTD small phosphatase like* / CTD small phosphatase-like protein *ENSDARG0000007167366
ctdsp2 / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 / O14595* / Q8BX07* / CTD small phosphatase 2* / Carboxy-terminal domain RNA polymerase II polyp...ENSDARG0000003610265
Q5U395 / ctdnep1a / CTD nuclear envelope phosphatase 1a / O95476* / Q3TP92* / CTDNEP1* / CTD nuclear envelope phosphatase 1*ENSDARG0000001651931
ctdnep1b / CTD nuclear envelope phosphatase 1b / O95476* / Q3TP92* / CTDNEP1* / CTD nuclear envelope phosphatase 1*ENSDARG0000003578131


Protein motifs (from Interpro)
Interpro ID Name
 IPR004274  FCP1 homology domain
 IPR011948  Dullard phosphatase domain, eukaryotic
 IPR023214  HAD superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IBA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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