ENSDARG00000036190


Danio rerio

Features
Gene ID: ENSDARG00000036190
  
Biological name :txnl4a
  
Synonyms : thioredoxin-like 4A / txnl4a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 20793237
Gene end: 20796910
  
Corresponding Affymetrix probe sets: Dr.23353.1.S1_at (Zebrafish Array)   NM_001005953_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000011451
Ensembl peptide - ENSDARP00000120884
NCBI entrez gene - 449780     See in Manteia.
RefSeq - NM_001005953
RefSeq Peptide - NP_001005953
swissprot - F1QTJ2
ZFIN ID - ZDB-GENE-041010-25
Ensembl - ENSDARG00000036190
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
txnl4b / thioredoxin-like 4B / Q8BUH1* / Q9NX01*ENSDARG0000005896233


Protein motifs (from Interpro)
Interpro ID Name
 IPR004123  Dim1 family
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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