ENSDARG00000037362
Danio rerio | |
Features
| Gene ID: | ENSDARG00000037362 | | | | | Biological name : | scube2 | | | | | Synonyms : | scube2 / signal peptide, CUB domain, EGF-like 2 | | | | | Possible biological names infered from orthology : | Q9JJS0 / Q9NQ36 / Signal peptide, CUB and EGF-like domain-containing protein 2 / signal peptide, CUB domain and EGF like domain containing 2 | | | | | Species: | Danio rerio | | | | | Chr. number: | 7 | | Strand: | -1 | | Band: | | | Gene start: | 28569266 | | Gene end: | 28611145 | | | | | Corresponding Affymetrix probe sets: | | | | | | Cross references: | Ensembl peptide - ENSDARP00000054365
NCBI entrez gene - 503728
See in Manteia.
RefSeq - XM_005166391
RefSeq - XM_021477521
RefSeq - NM_001014813
RefSeq - XM_005166390
RefSeq Peptide - NP_001014813
swissprot - F1Q6K4
ZFIN ID - ZDB-GENE-050302-80
Ensembl - ENSDARG00000037362
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| scube1 / signal peptide, CUB domain, EGF-like 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain and EGF like domain containing 1* | ENSDARG00000063097 | 66 | | scube3 / signal peptide, CUB domain, EGF-like 3 / Q8IX30* / signal peptide, CUB domain and EGF like domain containing 3* | ENSDARG00000011490 | 59 | | matn4 / matrilin 4 / Q8VCP9* / O95460* / Q86T13* / CLEC14A* / C-type lectin domain containing 14A* / C-type lectin domain family 14 member A * | ENSDARG00000015947 | 13 | | cd248a / CD248 molecule, endosialin a / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule* | ENSDARG00000103713 | 13 | | cd248b / CD248 molecule, endosialin b / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule* | ENSDARG00000077938 | 12 | | si:dkey-163f14.6 | ENSDARG00000091602 | 12 | | thbd / thrombomodulin / P07204* / P15306* | ENSDARG00000092470 | 11 | | matn1 / matrilin 1 / P21941* / P51942* / Cartilage matrix protein * / matrilin 1, cartilage matrix protein* | ENSDARG00000030215 | 6 | | matn3a / matrilin 3a / MATN3* / O35701* / O15232* / matrilin 3* | ENSDARG00000069245 | 3 | | matn3b / matrilin 3b / MATN3* / O35701* / O15232* / matrilin 3* | ENSDARG00000069265 | 3 | | vwa1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5* | ENSDARG00000075468 | 3 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000022 | floor plate | floor plate morphology , abnormal
floor plate quality , abnormal |
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| | ZFA:0000135 | notochord | notochord quality , abnormal
notochord morphology , abnormal |
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| | ZFA:0000155 | somite | somite U-shaped , abnormal
somite contractile fiber decreased amount , abnormal
somite quality , abnormal
somite morphology , abnormal
somite anterior region lacks parts or has fewer parts of type slow muscle cell , abnormal
somite has fewer parts of type muscle pioneer , abnormal |
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| | ZFA:0000671 | horizontal myoseptum | horizontal myoseptum hypoplastic , abnormal
horizontal myoseptum aplastic , abnormal |
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| | ZFA:0001056 | myotome | myotome U-shaped , abnormal |
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| | ZFA:0001089 | myoseptum | myoseptum quality , abnormal |
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| | ZFA:0001094 | whole organism | whole organism movement behavioral quality , abnormal |
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| | ZFA:0001115 | trunk | trunk muscle pioneer decreased amount , abnormal
trunk fast muscle cell decreased amount , abnormal |
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| | ZFA:0001117 | post-vent region | post-vent region contractile fiber patchy , abnormal
post-vent region slow muscle cell decreased amount , abnormal
post-vent region structure , abnormal |
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| | ZFA:0009091 | melanocyte | melanocyte quality , abnormal
melanocyte morphology , abnormal
melanocyte irregular spatial pattern , abnormal |
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Interacting proteins (from Reactome)
No match
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