ENSDARG00000037647


Danio rerio

Features
Gene ID: ENSDARG00000037647
  
Biological name :rnf175
  
Synonyms : ring finger protein 175 / rnf175
  
Possible biological names infered from orthology : Q8N4F7
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 10037444
Gene end: 10048514
  
Corresponding Affymetrix probe sets: Dr.19063.1.S1_at (Zebrafish Array)   NM_200308_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108386
Ensembl peptide - ENSDARP00000054834
NCBI entrez gene - 393278     See in Manteia.
RefSeq - NM_001328343
RefSeq - NM_200308
RefSeq Peptide - NP_001315272
RefSeq Peptide - NP_956602
swissprot - B8A5M0
swissprot - F1QUH4
ZFIN ID - ZDB-GENE-040426-1104
Ensembl - ENSDARG00000037647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8N4F7ENSG00000145428Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf121 / ring finger protein 121 / Q8R1Z9* / Q9H920*ENSDARG0000006028269


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IBA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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