ENSDARG00000060282


Danio rerio

Features
Gene ID: ENSDARG00000060282
  
Biological name :rnf121
  
Synonyms : ring finger protein 121 / rnf121
  
Possible biological names infered from orthology : Q8R1Z9 / Q9H920
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 44773237
Gene end: 44784723
  
Corresponding Affymetrix probe sets: Dr.4050.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000079215
NCBI entrez gene - 606559     See in Manteia.
swissprot - E7EYE4
ZFIN ID - ZDB-GENE-050809-3
Ensembl - ENSDARG00000060282
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF121ENSGALG00000000868Gallus gallus
 Q9H920ENSG00000137522Homo sapiens
 Q8R1Z9ENSMUSG00000070426Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf175 / ring finger protein 175 / Q8N4F7*ENSDARG0000003764765


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001966 thigmotaxis IMP
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0019228 neuronal action potential IMP
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IBA
 biological_processGO:0072659 protein localization to plasma membrane IMP
 biological_processGO:1903069 regulation of ER-associated ubiquitin-dependent protein catabolic process IMP
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism lethal (sensu genetics) , abnormal
whole organism viability , abnormal
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 ZFA:0005277 skeletal muscle skeletal muscle action potential , abnormal
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 ZFA:0009052 motor neuron motor neuron action potential , abnormal
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 ZFA:0009150 Rohon-Beard neuron Rohon-Beard neuron action potential , abnormal
Rohon-Beard neuron voltage-gated sodium channel complex accumulation Rohon-Beard neuron endoplasmic reticulum, abnormal
Rohon-Beard neuron voltage-gated sodium channel complex accumulation Rohon-Beard neuron Golgi apparatus, abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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