ENSDARG00000038040


Danio rerio

Features
Gene ID: ENSDARG00000038040
  
Biological name :tpk1
  
Synonyms : thiamin pyrophosphokinase 1 / tpk1
  
Possible biological names infered from orthology : Q9H3S4 / Q9R0M5
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 18286427
Gene end: 18445254
  
Corresponding Affymetrix probe sets: Dr.21125.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119680
Ensembl peptide - ENSDARP00000055442
Ensembl peptide - ENSDARP00000139082
NCBI entrez gene - 450054     See in Manteia.
swissprot - E9QDZ8
swissprot - F1RBJ9
ZFIN ID - ZDB-GENE-041010-176
Ensembl - ENSDARG00000038040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TPK1ENSGALG00000040298Gallus gallus
 TPK1ENSG00000196511Homo sapiens
 Tpk1ENSMUSG00000029735Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006282  Thiamin pyrophosphokinase
 IPR007371  Thiamin pyrophosphokinase, catalytic domain
 IPR007373  Thiamin pyrophosphokinase, thiamin-binding domain
 IPR016966  Thiamin pyrophosphokinase, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006772 thiamine metabolic process IEA
 biological_processGO:0009229 thiamine diphosphate biosynthetic process IBA
 biological_processGO:0016310 phosphorylation IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004788 thiamine diphosphokinase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030975 thiamine binding IEA


Pathways (from Reactome)
Pathway description
Vitamin B1 (thiamin) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000038040 tpk1 / thiamin pyrophosphokinase 1 / Q9H3S4* / Q9R0M5*  / complex






 

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contact: otassy@igbmc.fr