ENSDARG00000038153


Danio rerio
domainbindinginsulin-likegrowthfactorlgals2bgalectinrecognitionconcanavalina-likelectinglucanasesuperfamilyvasculaturedevelopmentsproutingangiogenesiscellularcomponentregulationigftransportuptakeproteinsigfbpspost-translationalproteinphosphorylation

Features
Gene ID: ENSDARG00000038153
  
Biological name :lgals2b
  
Synonyms : lectin, galactoside-binding, soluble, 2b / lgals2b
  
Possible biological names infered from orthology : galectin 1 / LGALS1 / P09382 / P16045
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 603278
Gene end: 609887
  
Corresponding Affymetrix probe sets: Dr.15088.1.A1_at (Zebrafish Array)   NM_200514_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124603
Ensembl peptide - ENSDARP00000124875
Ensembl peptide - ENSDARP00000125939
Ensembl peptide - ENSDARP00000151176
Ensembl peptide - ENSDARP00000124248
Ensembl peptide - ENSDARP00000124716
NCBI entrez gene - 393486     See in Manteia.
RefSeq - XM_005172064
RefSeq - NM_200514
RefSeq Peptide - NP_956808
swissprot - F8W2I6
swissprot - F8W2U6
swissprot - I3ISQ0
ZFIN ID - ZDB-GENE-040426-1590
Ensembl - ENSDARG00000038153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CG-16ENSGALG00000042020Gallus gallus
 LGALS1ENSGALG00000012420Gallus gallus
 LGALS1ENSG00000100097Homo sapiens
 Lgals1ENSMUSG00000068220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lgals2a / lectin, galactoside-binding, soluble, 2a / LGALS1* / P16045* / P09382* / galectin 1*ENSDARG0000005494247
lgals1l1 / lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 / LGALS1* / P16045* / P09382* / galectin 1*ENSDARG0000008871142


Protein motifs (from Interpro)
Interpro ID Name
 IPR001079  Galectin, carbohydrate recognition domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
anatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure development
carbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate binding
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0002040 sprouting angiogenesis IGI
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr