ENSDARG00000038306


Danio rerio

Features
Gene ID: ENSDARG00000038306
  
Biological name :tsc22d1
  
Synonyms : tsc22d1 / TSC22 domain family, member 1
  
Possible biological names infered from orthology : P62500 / Q15714
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 18732505
Gene end: 18814737
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116421
Ensembl peptide - ENSDARP00000115165
Ensembl peptide - ENSDARP00000121300
Ensembl peptide - ENSDARP00000122272
NCBI entrez gene - 335842     See in Manteia.
RefSeq - NM_212745
RefSeq Peptide - NP_997910
swissprot - F1Q9K8
swissprot - B0V1G3
swissprot - F1R1Z6
swissprot - Q7SZP1
ZFIN ID - ZDB-GENE-030131-7785
Ensembl - ENSDARG00000038306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSC22D1ENSGALG00000016971Gallus gallus
 Q15714ENSG00000102804Homo sapiens
 P62500ENSMUSG00000022010Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsc22d2 / TSC22 domain family 2 / O75157* / TSC22 domain family member 2*ENSDARG0000004183921
zgc:65895ENSDARG0000003408610
si:ch211-220e11.3 / TSC22D3 (1 of many) / Q99576* / Q9Z2S7* / TSC22D3* / TSC22 domain family member 3* / TSC22 domain family protein 3 *ENSDARG0000010549810
tsc22d3 / TSC22 domain family, member 3 / Q99576* / Q9Z2S7* / TSC22 domain family protein 3 *ENSDARG000000756668


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr