ENSDARG00000075666


Danio rerio

Features
Gene ID: ENSDARG00000075666
  
Biological name :tsc22d3
  
Synonyms : tsc22d3 / TSC22 domain family, member 3
  
Possible biological names infered from orthology : Q99576 / Q9Z2S7 / TSC22 domain family protein 3
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 27998756
Gene end: 28001986
  
Corresponding Affymetrix probe sets: Dr.12437.1.A1_at (Zebrafish Array)   NM_200569_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000054114
NCBI entrez gene - 393541     See in Manteia.
RefSeq - NM_200569
RefSeq Peptide - NP_956863
swissprot - Q6NTI0
ZFIN ID - ZDB-GENE-040426-1433
Ensembl - ENSDARG00000075666
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSC22D3ENSGALG00000027069Gallus gallus
 Q99576ENSG00000157514Homo sapiens
 Q9Z2S7ENSMUSG00000031431Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-220e11.3 / TSC22D3 (1 of many) / Q99576* / Q9Z2S7* / TSC22D3* / TSC22 domain family member 3* / TSC22 domain family protein 3 *ENSDARG0000010549876
tsc22d1 / TSC22 domain family, member 1 / P62500* / Q15714*ENSDARG0000003830646
zgc:65895ENSDARG0000003408643
tsc22d2 / TSC22 domain family 2 / O75157* / TSC22 domain family member 2*ENSDARG0000004183943


Protein motifs (from Interpro)
Interpro ID Name
 IPR000580  TSC-22 / Dip / Bun


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0009953 dorsal/ventral pattern formation IMP
 biological_processGO:0030513 positive regulation of BMP signaling pathway IGI
 biological_processGO:0070236 negative regulation of activation-induced cell death of T cells IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , abnormal
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 ZFA:0000128 midbrain midbrain decreased size , abnormal
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 ZFA:0001094 whole organism whole organism wholly dorsalized , abnormal
whole organism posterior region decreased size , abnormal
whole organism anterior-posterior axis shortened , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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