ENSDARG00000038742


Danio rerio

Features
Gene ID: ENSDARG00000038742
  
Biological name :RBP1 (1 of many)
  
Synonyms : RBP1 (1 of many) / si:ch211-119o8.7
  
Possible biological names infered from orthology : P09455 / Q00915 / RBP1 / retinol binding protein 1 / retinol binding protein 1, cellular
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 39021282
Gene end: 39028052
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000056576
NCBI entrez gene - 100141334     See in Manteia.
swissprot - A9JR93
ZFIN ID - ZDB-GENE-070912-18
Ensembl - ENSDARG00000038742
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBP1ENSGALG00000037875Gallus gallus
 RBP1ENSG00000114115Homo sapiens
 Rbp1ENSMUSG00000046402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbp1 / retinol binding protein 1b, cellular / Q00915* / P09455* / retinol binding protein 1* / retinol binding protein 1, cellular*ENSDARG0000001807766
rbp2a / retinol binding protein 2a, cellular / RBP2* / Q08652* / P50120* / retinol binding protein 2* / retinol binding protein 2, cellular*ENSDARG0000007003853
rbp5 / retinol binding protein 1a, cellular / P82980* / retinol binding protein 5*ENSDARG0000010148152
rbp7b / retinol binding protein 7b, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000007048650
rbp7a / retinol binding protein 7a, cellular / RBP7* / Q9EPC5* / Q96R05* / retinol binding protein 7* / retinol binding protein 7, cellular*ENSDARG0000009190649
rbp2b / retinol binding protein 2b, cellularENSDARG0000009377446
crabp2a / cellular retinoic acid binding protein 2, a / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000007397842
crabp1a / cellular retinoic acid binding protein 1a / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000004592640
crabp2b / cellular retinoic acid binding protein 2, b / CRABP2* / P22935* / P29373* / cellular retinoic acid binding protein 2*ENSDARG0000003044939
crabp1b / cellular retinoic acid binding protein 1b / CRABP1* / P29762* / P62965* / cellular retinoic acid binding protein 1*ENSDARG0000003590439
fabp7a / fatty acid binding protein 7, brain, a / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000000769730
fabp7b / fatty acid binding protein 7, brain, b / FABP7* / O15540* / P51880* / fatty acid binding protein 7* / Fatty acid-binding protein, brain *ENSDARG0000003465029
fabp11a / fatty acid binding protein 11a / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...ENSDARG0000001729927
fabp11b / fatty acid binding protein 11b / PMP2* / FABP4* / FABP5* / FABP9* / A6NFH5* / FABP12* / P02689* / P04117* / P15090* / P24526* / Q01469* / Q05816* / Q0Z7S8* / Q9DAK4* / O08716* / G...ENSDARG0000000231126
fabp3 / fatty acid binding protein 3, muscle and heart / P05413* / P11404* / fatty acid binding protein 3* / Fatty acid-binding protein, heart *ENSDARG0000002329026
CABZ01088982.1 / PMP2* / FABP9* / FABP4* / FABP5* / A6NFH5* / FABP12* / P02689* / P15090* / Q01469* / Q0Z7S8* / peripheral myelin protein 2* / fatty acid binding protein 4* / fatty acid bin...ENSDARG0000010925921


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein
 IPR031264  Retinol-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002138 retinoic acid biosynthetic process IEA
 biological_processGO:0006776 vitamin A metabolic process IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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