ENSDARG00000038870


Danio rerio

Features
Gene ID: ENSDARG00000038870
  
Biological name :slu7
  
Synonyms : slu7 / SLU7 homolog, splicing factor
  
Possible biological names infered from orthology : O95391 / Pre-mRNA-splicing factor SLU7 / Q8BHJ9
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 46003973
Gene end: 46018728
  
Corresponding Affymetrix probe sets: Dr.3350.1.A1_at (Zebrafish Array)   Dr.3350.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112935
Ensembl peptide - ENSDARP00000116895
NCBI entrez gene - 492495     See in Manteia.
RefSeq - XM_005169611
swissprot - F1RBL3
swissprot - F1RCR0
ZFIN ID - ZDB-GENE-041114-62
Ensembl - ENSDARG00000038870
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLU7ENSGALG00000034414Gallus gallus
 SLU7ENSG00000164609Homo sapiens
 Slu7ENSMUSG00000020409Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR021715  Pre-mRNA splicing Prp18-interacting factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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