ENSDARG00000038900


Danio rerio

Features
Gene ID: ENSDARG00000038900
  
Biological name :acadm
  
Synonyms : acadm / acyl-CoA dehydrogenase medium chain
  
Possible biological names infered from orthology : acyl-Coenzyme A dehydrogenase, medium chain / P11310 / P45952
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 26470070
Gene end: 26476150
  
Corresponding Affymetrix probe sets: Dr.7343.1.S1_at (Zebrafish Array)   NM_213010_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117024
Ensembl peptide - ENSDARP00000120606
NCBI entrez gene - 406283     See in Manteia.
RefSeq - NM_213010
RefSeq Peptide - NP_998175
swissprot - A2CG95
swissprot - A2CG94
ZFIN ID - ZDB-GENE-040426-1945
Ensembl - ENSDARG00000038900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACADMENSG00000117054Homo sapiens
 AcadmENSMUSG00000062908Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acads / acyl-CoA dehydrogenase short chain / P16219* / Q07417* / acyl-Coenzyme A dehydrogenase, short chain*ENSDARG0000003078134
acad8 / acyl-CoA dehydrogenase family, member 8 / Q9UKU7* / acyl-Coenzyme A dehydrogenase family, member 8*ENSDARG0000004265832
acad9 / acyl-CoA dehydrogenase family, member 9 / Q8JZN5* / Q9H845* / acyl-Coenzyme A dehydrogenase family, member 9*ENSDARG0000005562031
acadsb / acyl-CoA dehydrogenase short/branched chain / P45954* / Q9DBL1* / acyl-Coenzyme A dehydrogenase, short/branched chain*ENSDARG0000007678031
acadvl / acyl-CoA dehydrogenase very long chain / P49748* / P50544* / acyl-Coenzyme A dehydrogenase, very long chain*ENSDARG0000001668730
ivd / isovaleryl-CoA dehydrogenase / P26440* / Q9JHI5* / Isovaleryl-CoA dehydrogenase, mitochondrial *ENSDARG0000004285330
acadl / acyl-CoA dehydrogenase long chain / P28330* / acyl-Coenzyme A dehydrogenase, long-chain*ENSDARG0000008835730
zgc:85777ENSDARG0000002700929
gcdha / glutaryl-CoA dehydrogenase a / GCDH* / Q60759* / Q92947* / glutaryl-CoA dehydrogenase* / Glutaryl-CoA dehydrogenase, mitochondrial *ENSDARG0000003705725
gcdhb / glutaryl-CoA dehydrogenase b / GCDH* / Q60759* / Q92947* / glutaryl-CoA dehydrogenase* / Glutaryl-CoA dehydrogenase, mitochondrial *ENSDARG0000009883122


Protein motifs (from Interpro)
Interpro ID Name
 IPR006089  Acyl-CoA dehydrogenase, conserved site
 IPR006091  Acyl-CoA oxidase/dehydrogenase, central domain
 IPR009075  Acyl-CoA dehydrogenase/oxidase C-terminal
 IPR009100  Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
 IPR013786  Acyl-CoA dehydrogenase/oxidase, N-terminal
 IPR034180  Medium-chain specific acyl-CoA dehydrogenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003995 acyl-CoA dehydrogenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA
 molecular_functionGO:0070991 medium-chain-acyl-CoA dehydrogenase activity IEA


Pathways (from Reactome)
Pathway description
mitochondrial fatty acid beta-oxidation of unsaturated fatty acids
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Beta oxidation of octanoyl-CoA to hexanoyl-CoA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000038900 acadm / acyl-CoA dehydrogenase medium chain / P11310* / P45952* / acyl-Coenzyme A dehydrogenase, medium chain*  / complex






 

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