ENSDARG00000039669


Danio rerio
synthaseprocessactivityTSTA3 (1 of many)nad-dependentepimerasedehydratasenadp-bindingdomaingdp-l-fucosegdp-l-colitosenucleotide-sugarbiosyntheticoxidation-reductioncellularcomponentcatalyticoxidoreductasecoenzymebindinggdp-fucosebiosynthesis

Features
Gene ID: ENSDARG00000039669
  
Biological name :TSTA3 (1 of many)
  
Synonyms : TSTA3 (1 of many) / zgc:100864
  
Possible biological names infered from orthology : P23591 / Q13630 / tissue specific transplantation antigen P35B / TSTA3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 52492192
Gene end: 52525680
  
Corresponding Affymetrix probe sets: Dr.4806.1.A1_at (Zebrafish Array)   NM_001003528_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000057985
NCBI entrez gene - 445134     See in Manteia.
RefSeq - NM_001003528
RefSeq Peptide - NP_001003528
swissprot - Q6DC41
ZFIN ID - ZDB-GENE-040801-35
Ensembl - ENSDARG00000039669
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSTA3ENSGALG00000031525Gallus gallus
 TSTA3ENSG00000104522Homo sapiens
 Tsta3ENSMUSG00000022570Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsta3 / tissue specific transplantation antigen P35B / P23591* / Q13630*ENSDARG0000003966680
zgc:173683 / zgc:110348 / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*ENSDARG0000004266177


Protein motifs (from Interpro)
Interpro ID Name
 IPR001509  NAD-dependent epimerase/dehydratase
 IPR016040  NAD(P)-binding domain
 IPR028614  GDP-L-fucose synthase/GDP-L-colitose synthase


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processsmall molecule metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound menitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processsmall molecule metabsmall molecule metabolic processorganic substance meorganic substance metabolic processoxidation-reduction oxidation-reduction process
oxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activitycofactor bindingoxidoreductase activityoxidoreductase activitycofactor bindingcofactor binding
TypeGO IDTermEv.Code
 biological_processGO:0009226 nucleotide-sugar biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0050662 coenzyme binding IEA


Pathways (from Reactome)
Pathway description
GDP-fucose biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000042661 zgc:173683 / zgc:110348 / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*  / complex
 ENSDARG00000039669 zgc:100864 / TSTA3 (1 of many) / TSTA3* / P23591* / Q13630* / tissue specific transplantation antigen P35B*  / complex
 ENSDARG00000039666 tsta3 / tissue specific transplantation antigen P35B / P23591* / Q13630*  / complex






 

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