ENSDARG00000039999


Danio rerio

Features
Gene ID: ENSDARG00000039999
  
Biological name :slc13a5b
  
Synonyms : slc13a5b / solute carrier family 13 (sodium-dependent citrate transporter), member 5b
  
Possible biological names infered from orthology : Q67BT3 / Q86YT5 / SLC13A5 / solute carrier family 13 member 5
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 26573676
Gene end: 26593684
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128529
Ensembl peptide - ENSDARP00000058513
NCBI entrez gene - 100006328     See in Manteia.
RefSeq - XM_001345074
swissprot - X1WE78
swissprot - E7F3R9
ZFIN ID - ZDB-GENE-130530-605
Ensembl - ENSDARG00000039999
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC13A5ENSGALG00000005995Gallus gallus
 Q86YT5ENSG00000141485Homo sapiens
 Q67BT3ENSMUSG00000020805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc13a5a / info solute carrier family 13 (sodium-dependent citrate transporter), member 5a / Q86YT5* / Q67BT3* / SLC13A5* / solute carrier family 13 member 5*ENSDARG0000007769169
slc13a2 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 / Q13183* / solute carrier family 13 member 2*ENSDARG0000005385359
slc13a3 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 / Q8WWT9* / Q91Y63* / solute carrier family 13 member 3*ENSDARG0000006947846
slc13a1 / solute carrier family 13 member 1 / Q9BZW2* / Q9JHI4*ENSDARG0000004563843
slc13a4 / solute carrier family 13 (sodium/sulfate symporter), member 4 / Q9UKG4* / solute carrier family 13 member 4*ENSDARG0000005905342


Protein motifs (from Interpro)
Interpro ID Name
 IPR001898  Solute carrier family 13
 IPR031312  Sodium/sulphate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098656 anion transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA


Pathways (from Reactome)
Pathway description
Sodium-coupled sulphate, di- and tri-carboxylate transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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