ENSDARG00000077691


Danio rerio
transportslc13a5asodiumsulphatemembranesolutecarrierfamilysymporterconservedsiteioncitratetransmembraneintegralcomponenttransporteractivitysodium-coupleddi-tri-carboxylatetransporters

Features
Gene ID: ENSDARG00000077691
  
Biological name :slc13a5a
  
Synonyms : info solute carrier family 13 (sodium-dependent citrate transporter), member 5a / slc13a5a
  
Possible biological names infered from orthology : Q67BT3 / Q86YT5 / SLC13A5 / solute carrier family 13 member 5
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 40053666
Gene end: 40083567
  
Corresponding Affymetrix probe sets: Dr.22220.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000157095
Ensembl peptide - ENSDARP00000121887
NCBI entrez gene - 503788     See in Manteia.
RefSeq - NM_001142566
RefSeq - XM_005161432
RefSeq Peptide - NP_001136038
swissprot - E9QEI2
ZFIN ID - ZDB-GENE-030131-4628
Ensembl - ENSDARG00000077691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC13A5ENSGALG00000005995Gallus gallus
 Q86YT5ENSG00000141485Homo sapiens
 Q67BT3ENSMUSG00000020805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc13a5b / solute carrier family 13 (sodium-dependent citrate transporter), member 5b / Q67BT3* / Q86YT5* / SLC13A5* / solute carrier family 13 member 5*ENSDARG0000003999975
slc13a2 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 / Q13183* / solute carrier family 13 member 2*ENSDARG0000005385362
slc13a3 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 / Q8WWT9* / Q91Y63* / solute carrier family 13 member 3*ENSDARG0000006947846
slc13a1 / solute carrier family 13 member 1 / Q9BZW2* / Q9JHI4*ENSDARG0000004563845
slc13a4 / solute carrier family 13 (sodium/sulfate symporter), member 4 / Q9UKG4* / solute carrier family 13 member 4*ENSDARG0000005905342


Protein motifs (from Interpro)
Interpro ID Name
 IPR001898  Solute carrier family 13
 IPR031312  Sodium/sulphate symporter, conserved site


Gene Ontology (GO)
establishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationestablishment of localizationresponse to chemicalresponse to chemical
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0015746 citrate transport IDA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA


Pathways (from Reactome)
Pathway description
Sodium-coupled sulphate, di- and tri-carboxylate transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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