ENSDARG00000040024


Danio rerio

Features
Gene ID: ENSDARG00000040024
  
Biological name :gpd1l
  
Synonyms : glycerol-3-phosphate dehydrogenase 1 like / gpd1l / Q5XIZ6
  
Possible biological names infered from orthology : Q3ULJ0 / Q8N335
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 39248644
Gene end: 39267227
  
Corresponding Affymetrix probe sets: Dr.18456.1.A1_at (Zebrafish Array)   NM_001005934_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000058549
Ensembl peptide - ENSDARP00000123149
NCBI entrez gene - 449663     See in Manteia.
RefSeq - NM_001005934
RefSeq Peptide - NP_001005934
swissprot - Q5XIZ6
ZFIN ID - ZDB-GENE-041010-220
Ensembl - ENSDARG00000040024
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPD1LENSGALG00000011481Gallus gallus
 GPD1LENSG00000152642Homo sapiens
 Gpd1lENSMUSG00000050627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gpd1c / glycerol-3-phosphate dehydrogenase 1cENSDARG0000003694272
gpd1b / glycerol-3-phosphate dehydrogenase 1b / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*ENSDARG0000004318071
gpd1a / glycerol-3-phosphate dehydrogenase 1a / GPD1* / P13707* / P21695* / glycerol-3-phosphate dehydrogenase 1* / glycerol-3-phosphate dehydrogenase 1 (soluble)*ENSDARG0000004370171


Protein motifs (from Interpro)
Interpro ID Name
 IPR006109  Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
 IPR006168  Glycerol-3-phosphate dehydrogenase, NAD-dependent
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR011128  Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR016040  NAD(P)-binding domain
 IPR017751  Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006072 glycerol-3-phosphate metabolic process IEA
 biological_processGO:0046168 glycerol-3-phosphate catabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0009331 glycerol-3-phosphate dehydrogenase complex IEA
 molecular_functionGO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000040024 gpd1l / Q5XIZ6 / glycerol-3-phosphate dehydrogenase 1 like / Q3ULJ0* / Q8N335*  / complex






 

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