ENSDARG00000040503


Danio rerio

Features
Gene ID: ENSDARG00000040503
  
Biological name :sb:cb81
  
Synonyms : sb:cb81
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 49309953
Gene end: 49318823
  
Corresponding Affymetrix probe sets: Dr.13772.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089190
NCBI entrez gene - 100334443     See in Manteia.
RefSeq - XM_002665422
swissprot - E7F3S4
ZFIN ID - ZDB-GENE-030131-9939
Ensembl - ENSDARG00000040503
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zfp36l1a / zinc finger protein 36, C3H type-like 1a / Q07352* / P23950* / ZFP36L1* / ZFP36 ring finger protein like 1* / zinc finger protein 36, C3H type-like 1*ENSDARG0000001615436
zfp36l1b / zinc finger protein 36, C3H type-like 1b / Q07352* / P23950* / ZFP36L1* / ZFP36 ring finger protein like 1* / zinc finger protein 36, C3H type-like 1*ENSDARG0000002144334
zfp36l2 / zinc finger protein 36, C3H type-like 2 / P23949* / P47974* / ZFP36 ring finger protein like 2*ENSDARG0000002180633
zgc:114130ENSDARG0000004072531
zgc:162730 / ZFP36* / ZFP36 ring finger protein*ENSDARG0000010372030
cth1 / cysteine three histidine 1ENSDARG0000005732820


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061158 3"-UTR-mediated mRNA destabilization IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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