ENSDARG00000040571


Danio rerio

Features
Gene ID: ENSDARG00000040571
  
Biological name :ube4a
  
Synonyms : ube4a / ubiquitination factor E4A (UFD2 homolog, yeast)
  
Possible biological names infered from orthology : E9Q735 / Q14139 / ubiquitination factor E4A
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 23423672
Gene end: 23443937
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119015
Ensembl peptide - ENSDARP00000059375
Ensembl peptide - ENSDARP00000140935
NCBI entrez gene - 557121     See in Manteia.
swissprot - E7F6E1
swissprot - F2Z4X1
ZFIN ID - ZDB-GENE-070410-21
Ensembl - ENSDARG00000040571
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE4AENSGALG00000031134Gallus gallus
 UBE4AENSG00000110344Homo sapiens
 Ube4aENSMUSG00000059890Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube4b / ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) / O95155* / Q9ES00* / ubiquitination factor E4B*ENSDARG0000003701723


Protein motifs (from Interpro)
Interpro ID Name
 IPR003613  U box domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019474  Ubiquitin conjugation factor E4, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0034450 ubiquitin-ubiquitin ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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