ENSDARG00000042559


Danio rerio

Features
Gene ID: ENSDARG00000042559
  
Biological name :tnni1c
  
Synonyms : tnni1c / troponin I, skeletal, slow c
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 6625348
Gene end: 6634424
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062422
Ensembl peptide - ENSDARP00000151406
Ensembl peptide - ENSDARP00000153636
NCBI entrez gene - 751665     See in Manteia.
RefSeq - NM_001045382
RefSeq Peptide - NP_001038847
swissprot - Q0P3Z4
ZFIN ID - ZDB-GENE-060825-192
Ensembl - ENSDARG00000042559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnni1d / troponin I, skeletal, slow dENSDARG0000007376680
tnni1b / troponin I type 1b (skeletal, slow) / TNNI1* / P19237* / troponin I1, slow skeletal type*ENSDARG0000005270862
tnni1a / troponin I type 1a (skeletal, slow) / TNNI1* / Q9WUZ5* / P19237* / troponin I1, slow skeletal type* / Troponin I, slow skeletal muscle *ENSDARG0000000047460
tnni4b.2 / troponin I4b, tandem duplicate 2ENSDARG0000003667153
tnni2a.1 / troponin I type 2a (skeletal, fast), tandem duplicate 1 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000004559250
tnni2b.1 / troponin I type 2b (skeletal, fast), tandem duplicate 1 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000003595849
tnni2a.4 / troponin I type 2a (skeletal, fast), tandem duplicate 4 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000002906948
tnni2b.2 / troponin I type 2b (skeletal, fast), tandem duplicate 2 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000002999548
tnni4a / troponin I4aENSDARG0000009987047
tnni2a.3 / troponin I type 2a (skeletal, fast), tandem duplicate 3 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000001375246
tnni2a.2 / troponin I type 2a (skeletal, fast), tandem duplicate 2 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000000584144
tnni4b.1 / troponin I4b, tandem duplicate 1ENSDARG0000009299944


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IBA
 biological_processGO:0060048 cardiac muscle contraction IBA
 cellular_componentGO:0005861 troponin complex IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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