ENSDARG00000043406


Danio rerio

Features
Gene ID: ENSDARG00000043406
  
Biological name :slc8a1b
  
Synonyms : slc8a1b / solute carrier family 8 (sodium/calcium exchanger), member 1b
  
Possible biological names infered from orthology : P32418 / SLC8A1 / solute carrier family 8 member A1 / solute carrier family 8 (sodium/calcium exchanger), member 1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 22311413
Gene end: 22501970
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126373
Ensembl peptide - ENSDARP00000136905
Ensembl peptide - ENSDARP00000109925
NCBI entrez gene - 797199     See in Manteia.
RefSeq - NM_001039144
RefSeq Peptide - NP_001034233
swissprot - B2CZC2
swissprot - Q32SG7
ZFIN ID - ZDB-GENE-060110-3
Ensembl - ENSDARG00000043406
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC8A1ENSGALG00000008544Gallus gallus
 P32418ENSG00000183023Homo sapiens
 Slc8a1ENSMUSG00000054640Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc8a1a / solute carrier family 8 (sodium/calcium exchanger), member 1a / SLC8A1* / P32418* / solute carrier family 8 member A1* / solute carrier family 8 (sodium/calcium exchanger), member 1*ENSDARG0000001342277
slc8a3 / solute carrier family 8 (sodium/calcium exchanger), member 3 / P57103* / S4R2P9* / solute carrier family 8 member A3*ENSDARG0000000493167
slc8a4a / solute carrier family 8 (sodium/calcium exchanger), member 4aENSDARG0000005515467
slc8a4b / solute carrier family 8 (sodium/calcium exchanger), member 4bENSDARG0000003714566
slc8a2b / solute carrier family 8 (sodium/calcium exchanger), member 2b / Q9UPR5* / SLC8A2* / Q8K596* / solute carrier family 8 member A2* / solute carrier family 8 (sodium/calcium exchange...ENSDARG0000010059263
slc8a2a / solute carrier family 8 (sodium/calcium exchanger), member 2a / Q9UPR5* / SLC8A2* / Q8K596* / solute carrier family 8 member A2* / solute carrier family 8 (sodium/calcium exchange...ENSDARG0000000891259
adgrv1 / adhesion G protein-coupled receptor V1 / Q8VHN7* / Q8WXG9*ENSDARG0000002113725


Protein motifs (from Interpro)
Interpro ID Name
 IPR001623  DnaJ domain
 IPR003644  Na-Ca exchanger/integrin-beta4
 IPR004836  Sodium/calcium exchanger protein
 IPR004837  Sodium/calcium exchanger membrane region
 IPR032452  Sodium/calcium exchanger domain, C-terminal extension


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005432 calcium:sodium antiporter activity IEA


Pathways (from Reactome)
Pathway description
Reduction of cytosolic Ca++ levels
Sodium/Calcium exchangers
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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