ENSDARG00000043734


Danio rerio

Features
Gene ID: ENSDARG00000043734
  
Biological name :trmu
  
Synonyms : trmu / tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
  
Possible biological names infered from orthology : O75648 / Q9DAT5
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 28338642
Gene end: 28353538
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064218
NCBI entrez gene - 553625     See in Manteia.
RefSeq - NM_001020599
RefSeq Peptide - NP_001018435
swissprot - F1QRX8
ZFIN ID - ZDB-GENE-050522-540
Ensembl - ENSDARG00000043734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMUENSGALG00000031922Gallus gallus
 TRMUENSG00000100416Homo sapiens
 TrmuENSMUSG00000022386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004506  tRNA-specific 2-thiouridylase
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR023382  Adenine nucleotide alpha hydrolase-like domains


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016783 sulfurtransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr