ENSDARG00000044136


Danio rerio

Features
Gene ID: ENSDARG00000044136
  
Biological name :rab3gap2
  
Synonyms : rab3gap2 / RAB3 GTPase activating protein subunit 2 (non-catalytic)
  
Possible biological names infered from orthology : Q9H2M9 / RAB3 GTPase activating non-catalytic protein subunit 2
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 25609826
Gene end: 25630848
  
Corresponding Affymetrix probe sets: Dr.21215.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126559
Ensembl peptide - ENSDARP00000109256
Ensembl peptide - ENSDARP00000096276
NCBI entrez gene - 368905     See in Manteia.
RefSeq - NM_001004528
RefSeq - XM_017351602
RefSeq Peptide - NP_001004528
swissprot - K7DYN0
swissprot - F1QEJ6
swissprot - Q7ZYZ0
ZFIN ID - ZDB-GENE-030616-610
Ensembl - ENSDARG00000044136
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB3GAP2ENSGALG00000009503Gallus gallus
 Q9H2M9ENSG00000118873Homo sapiens
 Rab3gap2ENSMUSG00000039318Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001955  Pancreatic hormone-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR026059  Rab3-GAP regulatory subunit
 IPR029257  Rab3GAP regulatory subunit, C-terminal
 IPR032839  Rab3-GAP regulatory subunit, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0043087 regulation of GTPase activity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005179 hormone activity IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IBA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055291 rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*  / complex / reaction
 ENSDARG00000056122 gdi1 / GDP dissociation inhibitor 1 / P31150* / P50396* / Rab GDP dissociation inhibitor alpha *  / reaction
 ENSDARG00000098344 Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*  / reaction / complex






 

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