ENSDARG00000045140


Danio rerio

Features
Gene ID: ENSDARG00000045140
  
Biological name :lcmt1
  
Synonyms : lcmt1 / leucine carboxyl methyltransferase 1
  
Possible biological names infered from orthology : Q9UIC8
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 20378376
Gene end: 20409794
  
Corresponding Affymetrix probe sets: Dr.1860.1.A1_at (Zebrafish Array)   NM_001004645_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072402
NCBI entrez gene - 447907     See in Manteia.
RefSeq - NM_001004645
RefSeq Peptide - NP_001004645
swissprot - F1R781
ZFIN ID - ZDB-GENE-040912-75
Ensembl - ENSDARG00000045140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCMT1ENSGALG00000005973Gallus gallus
 LCMT1ENSG00000205629Homo sapiens
 Lcmt1ENSMUSG00000030763Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lcmt2 / leucine carboxyl methyltransferase 2 / O60294* / Q8BYR1* / tRNA wybutosine-synthesizing protein 4 *ENSDARG0000000074733


Protein motifs (from Interpro)
Interpro ID Name
 IPR007213  Methyltransferase Ppm1/Ppm2/Tcmp
 IPR016651  Leucine carboxyl methyltransferase 1, LCMT1
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006481 C-terminal protein methylation IBA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0018423 protein C-terminal leucine carboxyl O-methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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