ENSDARG00000045612


Danio rerio

Features
Gene ID: ENSDARG00000045612
  
Biological name :lrrc10
  
Synonyms : leucine rich repeat containing 10 / lrrc10
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 10 / Q5BKY1 / Q8K3W2
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 28672539
Gene end: 28674739
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067072
NCBI entrez gene - 798207     See in Manteia.
RefSeq - NM_001009559
RefSeq Peptide - NP_001009559
swissprot - F1R1Q4
ZFIN ID - ZDB-GENE-071119-6
Ensembl - ENSDARG00000045612
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC10ENSGALG00000009976Gallus gallus
 LRRC10ENSG00000198812Homo sapiens
 Lrrc10ENSMUSG00000060187Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mfhas1 / malignant fibrous histiocytoma amplified sequence 1 / Q3V1N1* / Q9Y4C4* / Malignant fibrous histiocytoma-amplified sequence 1 homolog *ENSDARG0000007910428
scrib / Q4H4B6 / scribbled planar cell polarity protein / Q14160* / Q80U72*ENSDARG0000000086127
lrrc7 / leucine rich repeat containing 7 / Q96NW7*ENSDARG0000007967024
erbin / erbb2 interacting protein / Q80TH2* / Q96RT1*ENSDARG0000004428123
lrrc1 / leucine rich repeat containing 1 / Q9BTT6*ENSDARG0000010268423
shoc2 / Q1L8Y7 / SHOC2 leucine-rich repeat scaffold protein / O88520* / Q9UQ13* / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA.*ENSDARG0000004085321
lrrc40 / leucine rich repeat containing 40 / Q9H9A6* / leucine-rich repeat-containing protein 40 isoform b *ENSDARG0000001770819
ascl1b / achaete-scute family bHLH transcription factor 1bENSDARG0000000970218
lrrc30a / leucine rich repeat containing 30a / A6NM36* / LRRC30* / leucine rich repeat containing 30*ENSDARG0000002971010


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle decreased size , abnormal
cardiac ventricle decreased volume , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart cardiac muscle cell decreased amount , abnormal
heart linear , abnormal
heart insufficient , abnormal
Show

 ZFA:0000471 atrium atrium elongated , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased fluid flow , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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