ENSDARG00000045900


Danio rerio

Features
Gene ID: ENSDARG00000045900
  
Biological name :agbl5
  
Synonyms : agbl5 / ATP/GTP binding protein-like 5
  
Possible biological names infered from orthology : Cytosolic carboxypeptidase-like protein 5 / Q09M02 / Q8NDL9
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 737539
Gene end: 760560
  
Corresponding Affymetrix probe sets: Dr.10964.1.A1_at (Zebrafish Array)   NM_001004113_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094377
NCBI entrez gene - 445479     See in Manteia.
RefSeq - NM_001004113
RefSeq - XM_017355000
RefSeq Peptide - NP_001004113
swissprot - F1QNG5
ZFIN ID - ZDB-GENE-040822-29
Ensembl - ENSDARG00000045900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGBL5ENSGALG00000038639Gallus gallus
 AGBL5ENSG00000084693Homo sapiens
 Agbl5ENSMUSG00000029165Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agbl2 / ATP/GTP binding protein-like 2 / Q5U5Z8* / Q8CDK2* / Mus musculus ATP/GTP binding protein-like 2 (Agbl2), transcript variant 2, mRNA.*ENSDARG0000007998317
agtpbp1 / ATP/GTP binding protein 1 / Q641K1* / Q9UPW5* / Cytosolic carboxypeptidase 1 *ENSDARG0000010521417
AGBL1 / si:ch73-141f14.1 / Q09M05* / Q96MI9* / Cytosolic carboxypeptidase 4 * / ATP/GTP binding protein like 1*ENSDARG0000010438414
agbl4 / ATP/GTP binding protein-like 4 / Q5VU57*ENSDARG000000680506
agbl4 / ATP/GTP binding protein-like 4 / Q5VU57*ENSDARG000001108386


Protein motifs (from Interpro)
Interpro ID Name
 IPR000834  Peptidase M14, carboxypeptidase A
 IPR034286  Cytosolic carboxypeptidase-like protein 5 catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0035608 protein deglutamylation IEA
 molecular_functionGO:0004181 metallocarboxypeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000048 olfactory placode olfactory placode morphology , abnormal
olfactory placode decreased size , abnormal
olfactory placode cilium aggregated , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
pronephros cilium movement process quality , abnormal
pronephros motile cilium paralysed , abnormal
pronephros motile cilium decreased coordination , abnormal
Show

 ZFA:0001094 whole organism whole organism curved ventral , abnormal
whole organism curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system edematous , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr