ENSDARG00000051981


Danio rerio
membraneSTX3snarevesiclesynapticdomainsyntaxinintracellulartransportdockingfusiontargetcoiled-coilhomologyn-terminalepimorphinconservedsitesyntaxin-proteinexocytosisvesicle-mediatedpresynapticactivezoneplasmaintegralcomponentcomplexpresynapsebinding

Features
Gene ID: ENSDARG00000051981
  
Biological name :STX3
  
Synonyms : STX3 / zgc:165520
  
Possible biological names infered from orthology : Q13277 / Q64704 / syntaxin 3
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 44826316
Gene end: 44835738
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113682
Ensembl peptide - ENSDARP00000132795
Ensembl peptide - ENSDARP00000118118
NCBI entrez gene - 571872     See in Manteia.
RefSeq - NM_001308827
RefSeq Peptide - NP_001295756
swissprot - E9QIP3
swissprot - B8A651
swissprot - A0A0R4ICQ9
ZFIN ID - ZDB-GENE-070620-13
Ensembl - ENSDARG00000051981
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX3ENSG00000166900Homo sapiens
 Stx3ENSMUSG00000041488Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx3a / syntaxin 3A / STX3* / Q64704* / Q13277* / syntaxin 3*ENSDARG0000000188071
stx1b / syntaxin 1B / P61264* / P61266*ENSDARG0000000050354
stx2b / syntaxin 2b / STX2* / P32856* / syntaxin 2*ENSDARG0000006821751
stx1a / syntaxin 1A (brain) / O35526* / Q16623* / syntaxin 1A*ENSDARG0000005899447
stx4 / syntaxin 4 / Stx4a* / P70452* / Q12846*ENSDARG0000005251835
stx2a / syntaxin 2a / STX2* / P32856* / syntaxin 2*ENSDARG0000000461827
stx11b.1 / syntaxin 11b, tandem duplicate 1 / STX11* / O75558* / syntaxin 11*ENSDARG0000002929026
stx11b.2 / syntaxin 11b, tandem duplicate 2 / STX11* / O75558* / syntaxin 11*ENSDARG0000004223126
stx11a / syntaxin 11a / STX11* / O75558* / syntaxin 11*ENSDARG0000004403926


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR031186  Syntaxin-3


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcell communicationregulation of biological qualitymembrane dockingcellular component organizationmacromolecule localimacromolecule localizationestablishment of locestablishment of localizationcellular localizatiocellular localizationcell communicationcell communicationregulation of biologregulation of biological qualitymembrane dockingmembrane dockingcellular component ocellular component organization
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellmembranesynapseorganelleprotein-containing complexcellcellmembranemembranesynapsesynapseorganelleorganelleprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0016081 synaptic vesicle docking IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0061025 membrane fusion IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IEA


Pathways (from Reactome)
Pathway description
Other interleukin signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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