ENSDARG00000053454


Danio rerio

Features
Gene ID: ENSDARG00000053454
  
Biological name :cntn3b
  
Synonyms : cntn3b / contactin 3b
  
Possible biological names infered from orthology : CNTN3 / contactin 3 / Q07409 / Q9P232
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 44584775
Gene end: 44711942
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000055034
NCBI entrez gene - 556251     See in Manteia.
swissprot - E7EZG5
ZFIN ID - ZDB-GENE-130530-645
Ensembl - ENSDARG00000053454
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTN3ENSGALG00000007862Gallus gallus
 CNTN3ENSG00000113805Homo sapiens
 Cntn3ENSMUSG00000030075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364764
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816156
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288054
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158448
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047238
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568536
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639627
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788126
chl1b / cell adhesion molecule L1-like b / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000010310926
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714925
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502525
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109925
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784324
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG0000010427721
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG0000011276719
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG000000569109


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0022008 neurogenesis IEA
 biological_processGO:0030182 neuron differentiation IEA
 molecular_functionGO:0005112 Notch binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr