ENSDARG00000103109


Danio rerio

Features
Gene ID: ENSDARG00000103109
  
Biological name :chl1b
  
Synonyms : cell adhesion molecule L1-like b / chl1b
  
Possible biological names infered from orthology : cell adhesion molecule L1 like / CHL1 / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecule L1-like protein / O00533 / P70232
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 44812444
Gene end: 44977428
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137212
Ensembl peptide - ENSDARP00000155355
Ensembl peptide - ENSDARP00000145919
Ensembl peptide - ENSDARP00000144053
Ensembl peptide - ENSDARP00000133592
NCBI entrez gene - 100318566     See in Manteia.
swissprot - A0A286YA23
swissprot - A0A0H2UKQ6
swissprot - A0A0H2UKL1
ZFIN ID - ZDB-GENE-091105-1
Ensembl - ENSDARG00000103109
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHL1ENSGALG00000037856Gallus gallus
 CHL1ENSG00000134121Homo sapiens
 Chl1ENSMUSG00000030077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chl1a / cell adhesion molecule L1-like a / CHL1* / P70232* / O00533* / cell adhesion molecule L1 like* / Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecul...ENSDARG0000007788149
nrcama / neuronal cell adhesion molecule a / NRCAM* / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSDARG0000000639638
nfasca / neurofascin homolog (chicken) a / NFASC* / O94856* / Q810U3* / neurofascin*ENSDARG0000006109936
l1cama / L1 cell adhesion molecule, paralog a / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000000714934
l1camb / L1 cell adhesion molecule, paralog b / L1CAM* / P32004* / L1 cell adhesion molecule*ENSDARG0000001502532
cntn3b / contactin 3b / CNTN3* / Q9P232* / contactin 3*ENSDARG0000005345421
cntn3a.1 / contactin 3a, tandem duplicate 1 / CNTN4* / Q8IWV2* / Q69Z26* / contactin 4*ENSDARG0000006288021
cntn4 / contactin 4 / Q69Z26* / Q8IWV2*ENSDARG0000009816121
cntn2 / contactin 2 / Q02246* / Q61330*ENSDARG0000000047220
cntn5 / contactin 5 / O94779* / P68500*ENSDARG0000002158420
cntn3a.2 / contactin 3a, tandem duplicate 2 / CNTN3* / Q07409* / Q9P232* / contactin 3*ENSDARG0000001364719
cntn1b / contactin 1b / CNTN1* / P12960* / Q12860* / contactin 1* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSDARG0000004568519
cntn1a / contactin 1a / CNTN1* / Q12860* / contactin 1*ENSDARG0000008784312
CU234171.1 / NFASC* / O94856* / neurofascin*ENSDARG0000005691010
BX942846.1 / CNTN6* / Q9JMB8* / Q9UQ52* / contactin 6*ENSDARG000001042778
LO017951.1 / CNTN6* / Q9UQ52* / contactin 6*ENSDARG000001127678


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026966  Neurofascin/L1/NrCAM, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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