ENSGALG00000037856


Gallus gallus

Features
Gene ID: ENSGALG00000037856
  
Biological name :CHL1
  
Synonyms : cell adhesion molecule L1 like / CHL1
  
Possible biological names infered from orthology : Neural cell adhesion molecule L1-like protein Processed neural cell adhesion molecule L1-like protein / O00533 / P70232
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 17238314
Gene end: 17341991
  
Corresponding Affymetrix probe sets: Gga.9521.2.S1_s_at (Chicken Array)   GgaAffx.22404.1.S1_s_at (Chicken Array)   GgaAffx.22404.4.S1_at (Chicken Array)   GgaAffx.22404.6.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047590
Ensembl peptide - ENSGALP00000052547
Ensembl peptide - ENSGALP00000046862
NCBI entrez gene - 416102     See in Manteia.
RefSeq - XM_015293222
RefSeq - XM_015293220
RefSeq - XM_015293221
RefSeq - XM_004944697
RefSeq - XM_015293211
RefSeq - XM_015293212
RefSeq - XM_015293214
RefSeq - XM_015293215
RefSeq - XM_015293216
RefSeq - XM_015293217
RefSeq - XM_015293218
RefSeq - XM_015293219
swissprot - A0A1D5P4I1
swissprot - A0A1D5P2G7
Ensembl - ENSGALG00000037856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chl1aENSDARG00000077881Danio rerio
 chl1bENSDARG00000103109Danio rerio
 CHL1ENSG00000134121Homo sapiens
 Chl1ENSMUSG00000030077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NRCAM / neuronal cell adhesion molecule precursor / Q810U4* / Q92823* / neuronal cell adhesion molecule*ENSGALG0000000951445
NFASC / O42414 / Neurofascin / O94856* / Q810U3*ENSGALG0000003177640
CNTN5 / Q90W79 / Contactin-5 / O94779* / P68500*ENSGALG0000001719723
CNTN2 / contactin-2 precursor / Q02246* / Q61330* / contactin 2*ENSGALG0000000065322
CNTN6 / contactin 6 / Q9JMB8* / Q9UQ52*ENSGALG0000000792722
CNTN4 / contactin 4 / Q69Z26* / Q8IWV2*ENSGALG0000000826322
CNTN3 / contactin 3 / Q07409* / Q9P232*ENSGALG0000000786221
CNTN1 / P14781 / Contactin-1 / Q12860* / P12960* / Mus musculus contactin 1 (Cntn1), transcript variant 4, mRNA.*ENSGALG0000000952321


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR026966  Neurofascin/L1/NrCAM, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0008344 adult locomotory behavior IEA
 biological_processGO:0031175 neuron projection development IEA
 biological_processGO:0035640 exploration behavior IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0050890 cognition IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0045177 apical part of cell IEA
 molecular_functionGO:0002020 protease binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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