ENSDARG00000054050


Danio rerio

Features
Gene ID: ENSDARG00000054050
  
Biological name :vsig8a
  
Synonyms : V-set and immunoglobulin domain containing 8a / vsig8a
  
Possible biological names infered from orthology : P0DPA2 / Q6P3A4 / V-set and immunoglobulin domain containing 8 / VSIG8
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 19525839
Gene end: 19551118
  
Corresponding Affymetrix probe sets: Dr.13149.1.A1_at (Zebrafish Array)   Dr.15847.1.A1_at (Zebrafish Array)   NM_001017805_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000148733
Ensembl peptide - ENSDARP00000134709
Ensembl peptide - ENSDARP00000136962
NCBI entrez gene - 550503     See in Manteia.
RefSeq - NM_001328510
RefSeq - NM_001017805
RefSeq Peptide - NP_001017805
RefSeq Peptide - NP_001315439
swissprot - F1QVI6
swissprot - A0A0R4IKJ7
ZFIN ID - ZDB-GENE-050417-338
Ensembl - ENSDARG00000054050
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VSIG8ENSG00000243284Homo sapiens
 Vsig8ENSMUSG00000049598Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vsig8b / V-set and immunoglobulin domain containing 8b / VSIG8* / P0DPA2* / Q6P3A4* / V-set and immunoglobulin domain containing 8*ENSDARG0000001368548
cxadr / Q90Y50 / CXADR, Ig-like cell adhesion molecule / Gm1123* / P78310* / P97792* / Coxsackievirus and adenovirus receptor homolog *ENSDARG0000004365834
BX927333.1 / CLMP* / Q9H6B4* / CXADR like membrane protein*ENSDARG0000011693727
igsf11 / immunoglobulin superfamily member 11 / P0C673* / Q5DX21*ENSDARG0000010978326
esamb / endothelial cell adhesion molecule b / ESAM* / Q96AP7* / Q925F2* / endothelial cell adhesion molecule* / Endothelial cell-selective adhesion molecule *ENSDARG0000007663921
esama / endothelial cell adhesion molecule a / ESAM* / Q96AP7* / endothelial cell adhesion molecule*ENSDARG0000007703920
zgc:165604ENSDARG0000002124119
si:zfos-1011f11.1 / GPA33* / Q99795* / glycoprotein A33* / glycoprotein A33 (transmembrane)*ENSDARG0000010022316
gpa33 / glycoprotein A33 (transmembrane) / Q99795* / glycoprotein A33*ENSDARG0000004089811
CABZ01039304.1 / CLMP* / Q9H6B4* / CXADR like membrane protein*ENSDARG000001164879


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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