ENSMUSG00000049598


Mus musculus

Features
Gene ID: ENSMUSG00000049598
  
Biological name :Vsig8
  
Synonyms : Q6P3A4 / V-set and immunoglobulin domain containing 8 / Vsig8
  
Possible biological names infered from orthology : P0DPA2
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: H3
Gene start: 172555938
Gene end: 172563717
  
Corresponding Affymetrix probe sets: 10351843 (MoGene1.0st)   1436671_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000058008
Ensembl peptide - ENSMUSP00000134997
NCBI entrez gene - 240916     See in Manteia.
MGI - MGI:3642995
RefSeq - XM_006496858
RefSeq - NM_177723
RefSeq - XM_006496856
RefSeq - XM_006496857
RefSeq Peptide - NP_808391
swissprot - Q6P3A4
Ensembl - ENSMUSG00000049598
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vsig8aENSDARG00000054050Danio rerio
 vsig8bENSDARG00000013685Danio rerio
 VSIG8ENSG00000243284Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cxadr / P97792 / Coxsackievirus and adenovirus receptor homolog / P78310* / CXADR, Ig-like cell adhesion molecule*ENSMUSG0000002286527
Clmp / Q8R373 / CXADR-like membrane protein / Q9H6B4*ENSMUSG0000003202425
Igsf11 / P0C673 / Immunoglobulin superfamily member 11 / Q5DX21*ENSMUSG0000002279022
Esam / Q925F2 / Endothelial cell-selective adhesion molecule / Q96AP7* / endothelial cell adhesion molecule*ENSMUSG0000000194620
Vsig1 / V-set and immunoglobulin domain containing 1 / Q86XK7*ENSMUSG0000003143019
Gpa33 / glycoprotein A33 (transmembrane) / Q99795* / glycoprotein A33*ENSMUSG0000000054417
Vsig2 / Q9Z109 / V-set and immunoglobulin domain containing 2 / Q96IQ7*ENSMUSG0000000194317
Gm1123ENSMUSG0000004486015


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR021157  Cytochrome c1, transmembrane anchor, C-terminal
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005627 increased circulating potassium level "greater than the normal concentration in the blood of this alkaline metallic element, the most abundant intracellular ion; anomalies in the extracellular (circulating) concentration have important implications for the function of excitable tissues, such as nerve and muscle" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Trip13tm1.1(KOMP)Vlcg/Trip13tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Trip13tm1.1(KOMP)Vlcg/Ucd

 MP:0010507 shortened RR interval "reduction in the length of the interval between an R wave and the next R wave; the RR interval is the inverse of the heart rate" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trip13tm1.1(KOMP)Vlcg/Trip13tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Trip13tm1.1(KOMP)Vlcg/Ucd

 MP:0010571 shortened ST segment "reduction in the length of time between the end of S-wave and the beginning of T-wave; reflects the amount of time the ventricles remain electrically depolarized" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Trip13tm1.1(KOMP)Vlcg/Trip13tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Trip13tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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