ENSDARG00000054096


Danio rerio

Features
Gene ID: ENSDARG00000054096
  
Biological name :rbm41
  
Synonyms : rbm41 / RNA binding motif protein 41
  
Possible biological names infered from orthology : Q8JZV4 / Q96IZ5 / RNA-binding protein 41
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 37996822
Gene end: 38031138
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000070715
Ensembl peptide - ENSDARP00000144569
swissprot - A0A286YBY7
swissprot - F1QN27
ZFIN ID - ZDB-GENE-041114-107
Ensembl - ENSDARG00000054096
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBM41ENSGALG00000004832Gallus gallus
 RBM41ENSG00000089682Homo sapiens
 Rbm41ENSMUSG00000031433Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnpc3 / RNA-binding region (RNP1, RRM) containing 3 / Q3UZ01* / Q96LT9* / RNA-binding protein 40 *ENSDARG0000001124716


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0032502 developmental process IBA
 cellular_componentGO:0005689 U12-type spliceosomal complex IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030626 U12 snRNA binding IBA
 molecular_functionGO:0097157 pre-mRNA intronic binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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